In the present study, the distribution of phospholipid ester-linked fatty acid composition (PLFA) in sediments were analyzed to determine the microbial biomass and microbial community structure. Thirty three fatty acids were identified in sediment samples analyzed for PLFA composition. Many fatty acids commonly considered to be indicative of bacterial contribution to sediments were identified in the study area. The calculated microbial biomass ranged from 1.5 x 10<7> to 9.3 x 10<7> cells/g dry weight of the sediment. Similarity analysis of the fatty acid composition revealed four different clusters and the possible microbial community structure is understood. The aerobic and anaerobic bacteria especially sulphate reducing bacteria are commonly distributed in the coastal sediment as evidenced by the relative proportion of unsaturated fatty acids and branched fatty acids respectively in total PLFA of sediments which are characteristic fatty acids of these bacteria.